Maybe most Pats fans won't want to hear this, but, the one conclusion I am left with is that Eli has arrived for good. He is on Brady's level.
2-0 in the SB vs a QB considerd to be one of the all-time greats? Not much else to say. Eli made the plays twice now, while Brady didn't.
I agree with your conclusion but not your logic (Eli and Brady don't play against each other, they play against the opposing team's defense).
But I think there is no question that Eli is an elite QB.
In fact, I'd rank him higher than Brady right now. And just so my fellow Pats fans don't jump all over me: Yes, Brady has a better record than Eli, Brady can be considered among the best all time, and Eli is not there (yet). But Brady is on the downside of his career, whereas Eli is not.